Course Information Lecture Notes Laboratory Schedule Experiment Protocols Exams Useful Links

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This Week

Monday, Feb. 18: OOPS! We had a major mix-up for scheduling BSW 243, so there is a change to the Course Schedule for next week. Instead of doing Westerns, we will be covering Mass Spec/Proteomics on Feb. 26 and 28. We will then do the Western Transfer experiment the following week, March 4 and 6. My most humble apologies for the confusion. More details will be given in class. Friday, Feb. 1: It has been brought to my attention that in the Protocol for Expt 2, there is no mention of plotting [PNPO-] vs. pH, as mentioned in class. Therefore, we will go with what the instructions in the protocol state. It is not necessary to make the plot mentioned above. Rooms and Times Section 1: Shantz 247 @ 8 am for lecture Section 2: Shantz 247 @ 1 pm for lecture Sections 1 & 2: Koffler 540 after lecture. Protocols for Experiments can usually be found on this page as LINKS, or on the Laboratory Schedule page. Instructor Room and Phone Number Email Office Hours Dr. James T. Hazzard (Course Coordinator)   BSW 342A, 621-7118 Koffler 540, 621-9989 jhazzard@email.arizona.edu Friday, 9 - 12 noon(BSW 342A) (M, T, W, Th : usually can be found in Koffler 540). Mark Gregory BSW 440; 626-0246 mtg@email.arizona.edu tba Daniel Martinez BSW 352; 621-5584 danielml@email.arizona.edu tba Chad Parks BSW 440; 626-0246 ckpark@email.arizona.edu tba Milos Babic BSW 440; 626-0246 mbabic@email.arizona.edu tba Aditi Bhuskute . Preceptor information can be obtained from indiviuals By appt only Abbas Tulli . Preceptor information can be obtained from individual By appt only   For assistance in finding a laboratory to do your Sr. Research Thesis work, Dr. Marc Tischler has put the following information together: http://www.biochem.arizona.edu/dept/dgre/res_advice.html Check it out and let me know if you need more information. A word to the wise, THIS IS NOT AN EASY PROCESS, BETTER TO START NOW!!!!!!!! Molecular Graphics Websites Instructions for the JAVA/JMOL installation. BIOC 462a JMOL scripts NCBI Home NCBI/Structure Home VAST Home

Tu., Apr.29: EDTA Inactivation of E. coli AP. Please Download and bring to class where you will work on it: EDTA_AP.pdf Olivia will be administering the Course Evaluations today as well as taking class pictures. Th, May 1: Research Presentations begin. Tu, May 5: Presentations cont'd Th, May 7:Dead day, turn in final AP manuscript. Please download and read Lab_Report.pdf, which provide guidelines for preparing your first report. A general guide for scientific writing can be obtained at : BMB_Sci_Writing.pdf. End of the semester assignments: ap_massspec_data.pdf . ap_structure_exercise.pdf. Molecular Graphics Exercises. Downloading and installing JMOL instructions. Molecular Biology Homework Mass Spec links:http://www.chem.arizona.edu/facilities/msf/index.html www.chem.arizona.edu/facilities/msf/BiochemLab/exercises.html mass_spec_hmwk.pdf   The Mass Spec/Proteomics material can be accessed at: http://www.chem.arizona.edu/facilities/msf/index.html Go to the bottom left of the page and click on the links there. Literature References for Mass Spec and Proteomics: (1) Hanash, S.M. (2000) Electrophoresis 21 (6): 1202-1209: Biomedical applications of two-dimensional electrophoresis using immobilized pH gradients: Current status. (2)Aebersold, R. and Mann, M. (2003)NATURE* 422 (6928): 198-207: Mass spectrometry-based proteomics. *There are several very stimulating articles in this issue of Nature.

Section #	Lecture	Lab
1	8 - 8:50 a.m. in Shantz 247	9 - 11:50 a.m. in Koffler 540
2	1 - 1:50 p.m. in Shantz 247	2 - 4:50 p.m. in Koffler 540