Course Information

Lecture Notes

Laboratory Schedule

Experiment Protocols

Exams

Useful Links

Announcements
This Week

Monday, Feb. 18: OOPS! We had a major mix-up for scheduling BSW 243, so there is a change to the Course Schedule for next week. Instead of doing Westerns, we will be covering Mass Spec/Proteomics on Feb. 26 and 28. We will then do the Western Transfer experiment the following week, March 4 and 6. My most humble apologies for the confusion. More details will be given in class.

Friday, Feb. 1: It has been brought to my attention that in the Protocol for Expt 2, there is no mention of plotting [PNPO-] vs. pH, as mentioned in class. Therefore, we will go with what the instructions in the protocol state. It is not necessary to make the plot mentioned above.

Rooms and Times

  • Section 1: Shantz 247 @ 8 am for lecture
  • Section 2: Shantz 247 @ 1 pm for lecture
  • Sections 1 & 2: Koffler 540 after lecture.

Protocols for Experiments can usually be found on this page as LINKS, or on the Laboratory Schedule page.

Instructor
Room and Phone Number
Email
Office Hours

Dr. James T. Hazzard (Course Coordinator)

 

BSW 342A, 621-7118

Koffler 540, 621-9989

Friday, 9 - 12 noon(BSW 342A)

(M, T, W, Th : usually can be found in Koffler 540).

Mark Gregory
BSW 440; 626-0246

tba

Daniel Martinez
BSW 352; 621-5584

tba

Chad Parks
BSW 440; 626-0246
tba
Milos Babic
BSW 440; 626-0246
mbabic@email.arizona.edu
tba

Aditi Bhuskute

.

Preceptor information can be obtained from indiviuals

By appt only
Abbas Tulli

.

Preceptor information can be obtained from individual
By appt only

 


For assistance in finding a laboratory to do your Sr. Research Thesis work, Dr. Marc Tischler has put the following information together:

http://www.biochem.arizona.edu/dept/dgre/res_advice.html
Check it out and let me know if you need more information. A word to the wise, THIS IS NOT AN EASY PROCESS, BETTER TO START NOW!!!!!!!!


Molecular Graphics Websites

Instructions for the JAVA/JMOL installation.

BIOC 462a JMOL scripts

NCBI Home

NCBI/Structure Home

VAST Home

Tu., Apr.29: EDTA Inactivation of E. coli AP.

Please Download and bring to class where you will work on it: EDTA_AP.pdf

Olivia will be administering the Course Evaluations today as well as taking class pictures.

Th, May 1: Research Presentations begin.

Tu, May 5: Presentations cont'd

Th, May 7:Dead day, turn in final AP manuscript.


Please download and read Lab_Report.pdf, which provide guidelines for preparing your first report.

A general guide for scientific writing can be obtained at :

BMB_Sci_Writing.pdf.


End of the semester assignments:

ap_massspec_data.pdf .

ap_structure_exercise.pdf.

Molecular Graphics Exercises.

Downloading and installing JMOL instructions.

Molecular Biology Homework


Mass Spec links:http://www.chem.arizona.edu/facilities/msf/index.html

www.chem.arizona.edu/facilities/msf/BiochemLab/exercises.html

mass_spec_hmwk.pdf

 

The Mass Spec/Proteomics material can be accessed at:

http://www.chem.arizona.edu/facilities/msf/index.html
Go to the bottom left of the page and click on the links there.

Literature References for Mass Spec and Proteomics:

(1) Hanash, S.M. (2000) Electrophoresis 21 (6): 1202-1209: Biomedical applications of two-dimensional electrophoresis using immobilized pH gradients: Current status.

(2)Aebersold, R. and Mann, M. (2003)NATURE* 422 (6928): 198-207: Mass spectrometry-based proteomics.

*There are several very stimulating articles in this issue of Nature.

   
Section #
Lecture
Lab
1
8 - 8:50 a.m. in Shantz 247
9 - 11:50 a.m. in Koffler 540
2

1 - 1:50 p.m. in Shantz 247

2 - 4:50 p.m. in Koffler 540


Biochemistry 463a
http://www.biochem.arizona.edu/classes/bioc463a/463a.html
Department of Biochemistry and Molecular Biophysics
The University of Arizona
jhazzard@email.arizona.edu 
All contents copyright © 1998-2000. All rights reserved.
Last revision Dec. 20, 2001