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| Lab Practicum Scenarios | |||
There are basically five AMG scenarios that cover most all of what we have discussed in this course. Your Lab Practicum could be based on one of these five scenarios, or on some combination of these strategies, or a novel strategy of your own. Each group will need to have the concept of their Lab Practicum approved by Dr. Miesfeld for overall feasibility and scope by Nov. 1, 2000. The Applied Molecular Gentic methods used in your lab practicum should be believable, ethical and terrestrial (no aliens or minerals from Planet Zork).
| Scenario A | Scenario B | Scenario C | Scenario D | Scenario E |
| 1. Protein has been purified based on a biochemical assay. 2. Isolate cDNA sequences encoding the gene ORF. 3. Generate antibodies using the cDNA. 4. Express the wild-type and mutant forms of the protein. 5. Determine the molecular mechanism of protein activity. |
1. Developmental gene is isolated from a model organism. 2. Use GenBank database to find orthologous genes in mammals. 3. Use ESTs to get cDNA and isolate genomic clones. 4. Construct transgenic mice with gene KO. 5. Determine developmental conseqeunces of gene defect in mice. |
1. cDNA isolated based on differential expression. 2. Isolate full-length cDNA and use with ESTs to build contig. 3. Use structure function analyses and cell transfection expts to study function. 4. Establish a genetic model in plants, flies or mice.
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1. Biochemical process is characterized by a cell-based assay. 2. Isolate cDNA sequences by expression cloning. 3. Isolate full-length cDNA and use with ESTs to build contig. 4. Use structure function analyses and cell transfection expts to study function. 5. Establish a genetic model in plants, flies or mice. |
1. A human genetic disease is mapped in a population. 2. Isolate disease locus using positional cloning methods. 3. Identify molecular basis for disease by correlating mutation to clinical phenotype. 4. Establish mouse model of human genetic disease. 5. Design a drug screen using this mouse model to develop new therapies. |
| Department of Biochemistry & Molecular Biophysics The University of Arizona Professor Roger L. Miesfeld RLM@u.arizona.edu © 2000. All rights reserved. |